PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.YAX06
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 466aa    MW: 51541.3 Da    PI: 7.0317
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.YAX06genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.72.4e-093073421454
                  HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  +r+N+++++L+el+P++      K +Ka++L  A++Y+k L
  Aradu.YAX06 307 ERVNKRIHTLKELIPNC-----NKIDKASTLDDAIDYLKTL 342
                  589*************8.....6****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.659293342IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.62E-12298353IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.38E-9301347No hitNo description
SMARTSM003534.1E-10304348IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.9E-7307342IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-9308351IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    Send to blast
MFNSSRKGMT RSSSLLHVNK DIGELVWENG EVKVQGRGAA VEERAAKLDR FYCSSILDQS  60
KKQIQQGCSN FKLISNTYSS SLSEQCKKPR IIDFSGSAQA KTKSHTLQHL GTCNNNNNNN  120
NNNNNQRTSL GGGMVNFPNF LVPSLFLNKS SSSAAAATSS KGHDHSSVVI DSSNNNKAAT  180
QELKETPFHQ VQPLDQHSHG QKLYHGASSS SASPPPPNNN IEQHLVVASS PVSSIGASND  240
PDIGIMRKQH EEYSNITDHD HDHDDTTTYI SDDDDEETED VIIAKETPAA GTRAKRSRDP  300
EVHNLSERVN KRIHTLKELI PNCNKIDKAS TLDDAIDYLK TLKLQLQIMS MGRGLCMPLM  360
MLHNHHNQLM CYRPSSGTGI PHQNMFDGFF NQMRPMIIPP SPPFINPTPP LAPLSIANSS  420
SRDVSHVQAI NNGDQVSLHQ HTTSSSYPFY FPTIINQEEK NNYGME
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015968803.10.0PREDICTED: transcription factor APG isoform X3
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF133291829
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.22e-21phytochrome interacting factor 3